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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929489.1_cds_XP_016476763.1_68557
CDS Infomation

[gene=LOC107798306] [db_xref=GeneID:107798306] [protein=protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha] [protein_id=XP_016476763.1] [location=complement(join(16038..16520,17266..17361,21185..21305,22004..22113,22450..22686))] [gbkey=CDS]
Sequence

ATGGATACTGGCGAAGATAAGCGAACGCGAATCCCGTTCAAGGAAAGGCCTGAATGGGCC
GATGTGAAGCCCGTTCCGCAAGACGACGGGCCCAGCCCGGTGGTTCCAATAGCCTACACT
GAAGATTTCTCGGAAACCATGGACTATTTCCGGGCAATCTACGTAGCCGACGAGCGGTCT
ACACGCGCCCTTCAGCTTACTGCTGAAACTATTCAGTTAAACCCTGGAAATTACACTGTA
TGGCAATTCAGGCGAGTTGTGCTGGAGGCACTGGGTGTTGATTTACATGAAGAATTGAAG
TTTGTTGATCGCATTGCTGGGGAGAACACAAAAAATTATCAAATATGGCATCATAGACGA
TGGCTTGCTGAGAAGCTGGGAGCTGAAGCTGTGACAAATGAGCTAGAATTCACGAAGAAA
ATATTTTCTCAGGATGCAAAGAATTATCATGCTTGGTCCCATCGGCAGTGGGTCCTTCAA
GCTCTTGGCGGATGGGAAAATGAGCTTGCCTATTGTCAACAACTCCTCGAAGATGATATT
TACAACAATTCTGCTTGGAATCAAAGATACTTTGTTGTGACAAGATCACCTCTATTGGGG
GGCCTAGCGGCAATGAGGGAATTGGAAGTGAATTACACAGTTCAAGCCCTCAGAGCTAGT
CCAGAGAATGAAAGTCCTTGGCGGTATCTTCGCGGTCTTTACAAGAATGATACACAATCT
CTAGTTGAGGATTCTCAAGTAGCAGCGGTGCTTTTGGATGTTTTAACCTCCAAAAATAAT
CATGTGCATGCTCTGAGCTTGCTGTTGGATCTTCTCTGTCATGGTTTTGAACCAAGGGAG
GAATTAAAAAGTGCAGTAGATGTTCTTACTCCACAGTCATGCTCACCTGATTTACCATTG
GCGAAGAGAATTTGTTCCATCTTGGAACATGCTGATCCAGTGAGAATAAACTATTGGAAT
TGGCGCAAAAGCACTATTCCTGTTCAATCAGCTAAGTGCCAGAATACAGATAGGCTGGCT
GATTTAAGTATGCAGGATGACTTGTAA

Peptide Sequence

PEP ID

XP_016476763.1
PEP Infomation

PREDICTED: protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Nicotiana tabacum]
Sequence

MDTGEDKRTRIPFKERPEWADVKPVPQDDGPSPVVPIAYTEDFSETMDYFRAIYVADERS
TRALQLTAETIQLNPGNYTVWQFRRVVLEALGVDLHEELKFVDRIAGENTKNYQIWHHRR
WLAEKLGAEAVTNELEFTKKIFSQDAKNYHAWSHRQWVLQALGGWENELAYCQQLLEDDI
YNNSAWNQRYFVVTRSPLLGGLAAMRELEVNYTVQALRASPENESPWRYLRGLYKNDTQS
LVEDSQVAAVLLDVLTSKNNHVHALSLLLDLLCHGFEPREELKSAVDVLTPQSCSPDLPL
AKRICSILEHADPVRINYWNWRKSTIPVQSAKCQNTDRLADLSMQDDL

Transcript Sequence

Gene sequence data has not been registered.